testGeneFamilies.poisson.fit {ShotgunFunctionalizeR}R Documentation

Fits a Poisson model to data

Description

This is the main function for fitting the Poisson model to one specific gene family. This function should only be called through testGeneFamilies.

Usage

testGeneFamilies.poisson.fit(data.vec, counts.total, design.matrix, overdisp=FALSE)

Arguments

data.vec The counts of a gene family as a vector
counts.total The total number of counts in the data set
design.matrix The design matrix
overdisp Should the quasi-Poisson model with overdispersion be used?

See Also

testGeneFamilies.poisson,family


[Package ShotgunFunctionalizeR version 1.0-1 Index]