MouseCOG {ShotgunFunctionalizeR}R Documentation

Metagenomic data from mouse gut annotated as COGs

Description

This dataset contains metagenomes sampled from lean and obese mouse gut. The data was generated by Turnbaugh {it et al.} 2006 and annotated as COGs using the IMG/M web-service (http://img.jgi.doe.gov/cgi-bin/m/main.cgi).

Usage

MouseCOG

Format

A list object with raw metagenomic data from five mouse (3 lean and 2 obese).

References

Turnbaugh, P.J., Ley, R.E., Mahowald, M.A., Magrini, V., Mardis, E.R., Gordon, J.I. (2006). An obesity-associated gut microbiome with increased capacity for energy harvest. Nature {bf 444} pp 1027-131.

See Also

MouseEC, OceanCOG, OceanEC


[Package ShotgunFunctionalizeR version 1.0-1 Index]