checkFamilyType {ShotgunFunctionalizeR} | R Documentation |
checkFamilyType
check that list of accession number are consistently
annotated according to the specified gene family type. If not, an error
message and the unconsistent rows are returned.
checkFamilyType(gene.families, type)
gene.families |
list of accession number |
type |
type of gene family to check. Use
getSupportedFamilies to get a list of supported families |
checkFamilyType
returns TRUE if successful.
accnos<-c(paste("COG", seq(1000,1005, by=1), sep=""), "EC1.1.1.1") checkFamilyType(accnos[1:6], "COG") ## Not run: checkFamilyType(accnos, "COG")