testGeneFamilies.poisson.fit {ShotgunFunctionalizeR} | R Documentation |
This is the main function for fitting the Poisson model to one
specific gene family. This function should only be called through
testGeneFamilies
.
testGeneFamilies.poisson.fit(data.vec, counts.total, design.matrix, overdisp=FALSE)
data.vec |
The counts of a gene family as a vector |
counts.total |
The total number of counts in the data set |
design.matrix |
The design matrix |
overdisp |
Should the quasi-Poisson model with overdispersion be used? |
testGeneFamilies.poisson
,family