getCategory {ShotgunFunctionalizeR}R Documentation

Returns a list of gene family categories

Description

Given a name of a type of gene familiy category (e.g. KEGG) and a gene family type, getCategory return the available gene family categories. This function is used internally in the ShotgunFunctionalizeR package.

Usage

getCategory(category, type)

Arguments

category type of gene family category
type type of gene family

Value

getCategory returns a list of gene family categories if successful.

See Also

checkFamilyType, detectGeneFamily, getSupportedFamilies,

Examples

cats<-getCategory("kegg", "EC")
cats[[1]]

[Package ShotgunFunctionalizeR version 1.0-3 Index]