testGeneCategories.independence {ShotgunFunctionalizeR}R Documentation

Tests for significant gene categories using the Gaussian sum statistic

Description

Gaussian sum

Usage

testGeneCategories.independence(data, categories, samples, simulate.p.value=TRUE, B=2000)

Arguments

data Data object
categories Category object
samples Samples to use
simulate.p.value Should the p-value be simulated
B B to fisher.test. See fisher.test

See Also

testGeneCategories, testGeneCategories.gaussiansum, testGeneCategories.enrichment, testGeneCategories.poisson


[Package ShotgunFunctionalizeR version 1.0-3 Index]